TABLE III

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Ubiquitin-related sequences found in preimplantation catalogues

UniGene #    Gene abbreviation or description    Gene abundances normalized for a library of 70,000 ESTs

196    Nedd8    7

22670    Mdm2    13

29405    Rbx1    19

3268    Ubc9    19

42944    skp1    33

29581    hrt1    5

28782    clAP (bcl10)    1

6765    seven in absentia homolog (siah1a)    4

784    brca1-connected    10

235    ubiquitin B    60

331    ubiquitin C    35

396    ubiquitin specific protease 9    22

1104    ubiquitin activating enzyme E1, Chr X    12

1570    ubiquitin conjugating enzyme 2e    47

1830    ubiquitin fusion degradation 1 like    3

3268    ubiquitin-conjugating enzyme E2I    18

3571    ubiquitin specific protease 5    3

4355    ubiquitin C-terminal hydrolase-related polypeptide    3

9002    ubiquitin conjugating enzyme E3A    6

12914    ubiquitin specific protease 2    2

12921    baculovirus inhibitor of apoptosis repeat containing ubiquitin-conjugating enzyme    4

13437    ESTs, weakly similar to ubiquitin carboxyl-terminal hydrolase 13    11

14833    ESTs, highly similar to ubiquitin    23

16553    Nedd4    9

21114    ESTs, highly similar to probable ubiquitin carboxyl-terminal hydrolase    11

23589    ubiquitin carboxyl-terminal esterase L3    3

24280    ESTs, moderately similar to probable ubiquitin carboxyl-terminal hydrolase    7

24870    ESTs, highly similar to UBP7 human ubiquitin carboxyl-terminal hydrolase    16

27294    ESTs, highly similar to putative ubiquitin carboxyl-terminal hydrolase C13A11.04C    10

27510    ubiquitin specific protease 23    2

28734    beta-transducin repeat containing protein    9

29807    ubiquitin carboxy-terminal hydrolase L1    50

30602    ESTs, highly similar to probable ubiquitin carboxyl-terminal hydrolase    3

38261    E2 ubiquitin conjugating enzyme    6

40986    ubiquitin specific protease 25    3

41084    ESTs, weakly similar to testis ubiquitin specific processing protease    1

43005    ubiquitin/60S ribosomal fusion protein    95

52067    ubiquitin C-terminal hydrolase 37    7

78312    ESTs, moderately similar to probable ubiquitin carboxyl-terminal hydrolase R10E11.3    1

124415    ESTs, weakly similar to ubiquitin protein ligase    1

132701    ESTs, weakly similar to ubiquitin specific protease UPB43    1

132843    ESTs, weakly similar to FAFX mouse probable ubiquitin carboxyl-terminal hydrolase FAF-X    1

423    ESTs, weakly similar to LIM domain interacting RING finger protein    17

4521    Tnf receptor associated factor 4    5

6750    ESTs, weakly similar to RING finger protein rfp    7

7198    makorin, ring finger protein, 1    26

7447    ring finger protein    1

9326    ring finger protein 13    13

15351    ESTs, weakly similar to BRCA1-associated RING domain protein    4

21281    ring finger protein 4    23

24777    ESTs, weakly similar to RING finger protein HAC1    1

25228    ring finger protein 11    5

28049    activin receptor interacting protein 1    8

28235    ring finger protein 7    10

28481    ESTs, weakly similar ro RING zinc finger protein    3

30051    ring finger protein 22    8

33857    ESTs, weakly similar to ring finger protein Fxy    6

44069    ring finger protein 12    3

45980    ESTs, weakly similar to small nuclear RING finger protein    1

86910    RING finger protein AO7 mRNA    1

100262    ESTs, weakly similar to ring finger protein    1